![]() It is important to note that this pipeline only works for this kit. Maxpar® Pathsetter™ () is a fully automated reporting and data analysis solution that automatically identifies 37 immune cell types in FCS files from samples processed with the Maxpar Direct™ Immune Profiling System (MDIP kit). Automated single-cell analysis and reporting Maxpar Pathsetter for CyTOF data from Fluidigm Data analysis companies Astrolabe DiagnosticsĪ company offering full CyTOF data analysis for users with no analysis experience or informatics support. We cover this topic and how to clean up your data in the Introduction to Helios course (see Training for more details). ![]() The IMC Platform employs the R algorithm Premessa to perform these tasks and highly recommends it to users as well. If the user would like this done as a service, the IMC Platform team can do this for the price of a half hour consultation. Data PreprocessingĪfter acquisition on the Helios, the user is responsible for panel editing, concatenation, normalization (with EQ beads) and debarcoding. At present, the IMC platform is not able to provide the service of data analysis but will assist you in finding a solution. We recommend getting in touch with a data analyst already in the planning phase of your experiments to ensure that the data you generate is of sufficient quality and all necessary controls are measured. ![]()
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